The Amazing Progressive Thalidomide Methods Discovered By My Associate

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Версія від 13:45, 23 лютого 2017, створена Shovel9perch (обговореннявнесок) (Створена сторінка: Identification of the ESBL blaCTX-M-1-, blaCTX-M-2-, blaCTX-M-25- and blaTEM-like genes and the AmpC blaCMY-2-like genes was done by PCR as previously described...)

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Identification of the ESBL blaCTX-M-1-, blaCTX-M-2-, blaCTX-M-25- and blaTEM-like genes and the AmpC blaCMY-2-like genes was done by PCR as previously described [13]. Sequencing of the genes was performed for representative isolates as reported [13, 19], using sets of consecutive primers specific for each gene type. In the case of blaTEM-like genes two types of PCR products were obtained with standard primers TEM-A and TEM-B, amplifying the entire gene together with its 5��-adjacent region [20]. Some isolates produced Thalidomide shorter amplicons of c. 950?bp alone or together with those of the expected size of c. 1100?bp. If both were observed for a single isolate, the two PCR products were extracted from agarose gels and sequenced separately. Plasmid profiling was carried out by PFGE of isolates' total DNA cut with nuclease S1 (New England Biolabs) [21]. After electrophoresis, DNA was blotted onto Hybond-N+ (Amersham Pharmacia Biotech, Little PARP inhibitor trial Chalfont, UK) and hybridized with blaTEM-92 or blaCTX-M-2 PCR probes, using the ECL Random-Prime Labeling and Detection system (Amersham Pharmacia Biotech). Mating was done with E.?coli A15 RifR [18]; transconjugants were selected with 128?mg/L rifampin and 2?mg/L ceftazidime or cefotaxime (Polfa). Plasmid DNA was purified with the QIAGEN Plasmid Midi Kit (QIAGEN, Hilden, Germany) and characterized by PstI (New England Biolabs) fingerprinting [22] and by PCR-based replicon typing (PBRT) [23]. Risk factors were analysed by comparing the ESBL-PM carriers with the ESBL-producing Enterobacteriaceae (ESBL-Ent)-negative group. The analysis was separated for each institution due to the big differences in the patient populations. ESBL-PM carriers were divided into ��admission�� and ��acquisition�� groups, according to the ESBL-PM PCI-32765 supplier identification time: before and after 72?h from admission, respectively. In cases when the first rectal culture was collected more than 72?h from admission, the acquisition status was not determined. Data were analysed using the univariate analysis: continuous variables were compared between the groups using an unpaired t-test and categorical parameters were compared using the chi-square test. p-values of ��0.05 were considered as a significant difference between the groups. The multivariate analysis using binary logistic regression prediction models was constructed using forward stepwise. All variables that were identified in the univariate analysis with a p?