Stories Provided by FRAX597-Masters Who Have Acheived Success

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Версія від 12:19, 4 червня 2017, створена Grill1offer (обговореннявнесок) (Створена сторінка: We also tested whether 3,122 SNPs within a region of?�� 50 kb of the 18 differentially expressed genes would show association with T2D in the DIAGRAM+ datab...)

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We also tested whether 3,122 SNPs within a region of?�� 50 kb of the 18 differentially expressed genes would show association with T2D in the DIAGRAM+ database at p?mTOR inhibitor with top-ranked SNPs in the DIAGRAM database together with the 48 T2D seeder genes to make a final rank list of 98 putative T2D genes. We used five different criteria to rank the genes: (1) correlation of gene expression in human islets with insulin secretion, (2) correlation of gene?expression in human islets with HbA1c, (3) SNPs within a region of?�� 50 kb of the gene associated with T2D in the DIAGRAM+ database (with the lowest p value), (4) differential FRAX597 in vivo expression in intact pancreatic islets from diabetic and nondiabetic donors, and (5) bioinformatic analysis of a published data set on differential expression in pancreatic �� cells from diabetic and nondiabetic individuals ( Marselli et?al., 2010). The genes were given a rank from 1 to 98 according to the above-listed criteria ( Table S7); genes with the lowest ranking sum will be the top-ranked genes. Out of the top 20 ranked genes, 7 genes were among the genes showing differential expression in islets from hyperglycemic and/normoglycemic donors (RASGRP1, CHL1, PDGFRA, LRFN2, FAM105A, GLP1R, OPHN1 and GPR120), 5 genes were derived from the T2DNet (PPM1K, ELAVL4, KLHDC5, CLCN4, and MAPRE3), 5 genes from the 48 T2D seeder genes (JAZF1, SLC2A2, G6PC2, KCNJ11, and SLC30A8), 3 genes from the top 10 in the DIAGRAM data set (RASGRF1, LRFN2, and PLCB4), and one gene from the PPI network (ABCC8) ( Table 1). The gene encoding JAZF1 (zinc finger 1) was top ranked, followed by CHL1 (cell adhesion molecule with homology to L1CAM), LRFN2 (leucine-rich repeat and fibronectin type III domain containing 2) and RASGRP1 (RAS guanyl releasing protein 1). Interestingly, the top 20 genes explained 7% and 24% of the variance in insulin secretion and HbA1c. Moreover, the mean centroid of these 20 genes differed strongly between hyperglycemic and normoglycemic donors (p?= 0.005) and was positively correlated with insulin secretion (R?= 0.45; p?= 0.001) and negatively with HbA1c levels (R?= ?0.50; p?= 0.0001) ( Figures 5A and 5B). GPR120 is an omega-3 fatty acid receptor and has been shown?to mediate GLP-1 secretion ( Hirasawa et?al., 2005). Culturing of?human islets with eicosapentaenoic acid (EPA), a GPR120 activating agent, prevented palmitate and linoleic acid-induced apoptosis and increased cell viability, but did not appreciably influence glucose-induced apoptosis.