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Figure?7. The relationship between estimated insertion ages (MY) and the redundancy of full-length REs identified in this study. Figure?7 suggests that intense retrotransposition waves have occurred, for some RE families of both superfamilies, LY294002 datasheet between 10 and 30 MY ago. One Gypsy and two Copia families may have been especially active between 23 and 29 MY ago. 4.?Discussion The repetitive component of the olive genome amounts to >70%.18 Around 30% of the genome is made of tandem repeat sequences and 40% of transposable elements. Such a genome composition appears to be peculiar to O. europaea. In other species, tandem repeats account for S6 Kinase isolated 254 full-length LTR-REs that can be added to the already available www.selleckchem.com/products/epacadostat-incb024360.html RE sequences.18 The isolated full-length REs and their remnants represent 12.33% of the olive genome and constitute a particular fraction of these sequences. First, the sample of REs may have been biased by the assembly process. Repetitive elements represent the most difficult parts to assemble in any shotgun assembly project and are often under-represented in whole-genome assemblies. We assembled pools of 384 BACs that should on average each comprise 42,000 nt of genomic sequence, corresponding to