Asure enrichment of modules using the golden-standard ciliary markers in the

For every network a list of genes within the ciliary module is N as it molds itself around the peptide. The complementarity dependent offered (genome scale evaluation). The 1.64028E+14 ``Module membership column offers Pearson correlations among expression profile of a given gene and integrated eigengene of the ciliary module (see Approaches). This measure ranks genes primarily based on their proximity for the center on the ciliary module (hub position). (XLS) Table S4 Cross-networks modules similarity. The initial table describes similarity on the ciliary module in every single dataset to the ciliary modules inside the other datasets. The other 3 tables describe similarity on the ciliary module in every dataset to nonciliary modules inside the other datasets. Since every single dataset consists of quite a few non-ciliary modules, the second table delivers median similarity values, the third table ?highest similarity values, plus the fourth table ?lowest similarity values (across all non-ciliary modules within a offered dataset). In each and every with the 4 tables, the topright corner of the matrix gives Fisher's exact test P-values describing significance of gene overlap involving the modules. The bottom-left corner delivers corresponding percentages of gene overlap (one hundred stands for the size with the smaller module in each pair). (XLS)Differential coexpression analysisHub genes of the ciliary module had been defined as genes that belong to this module and show an expression profile very correlated with all the ciliary module eigengene (MMciliary 0.75, see ``Expanding modules towards the genome scale).Asure enrichment of modules using the golden-standard ciliary markers from the Gherman's list (Fisher's exact test). Modules significantly enriched together with the ciliary markers are marked green. ``NS stands for ``non-significant (P.0.05). (XLS) Table S3 Gene composition of the ciliary modules. For each and every network a list of genes in the ciliary module is offered (genome scale analysis). The 1.64028E+14 ``Module membership column offers Pearson correlations in between expression profile of a given gene and integrated eigengene on the ciliary module (see Techniques). This measure ranks genes primarily based on their proximity towards the center in the ciliary module (hub position). (XLS) Table S4 Cross-networks modules similarity. The first table describes similarity on the ciliary module in every dataset to the ciliary modules within the other datasets. The other three tables describe similarity from the ciliary module in every dataset to nonciliary modules in the other datasets. Mainly because every dataset includes many non-ciliary modules, the second table offers median similarity values, the third table ?highest similarity values, plus the fourth table ?lowest similarity values (across all non-ciliary modules within a provided dataset).Asure enrichment of modules with the golden-standard ciliary markers in the Gherman's list (Fisher's exact test). Modules substantially enriched using the ciliary markers are marked green. ``NS stands for ``non-significant (P.0.05). (XLS) Table S3 Gene composition of the ciliary modules. For each network a list of genes inside the ciliary module is provided (genome scale analysis). The 1.64028E+14 ``Module membership column offers Pearson correlations between expression profile of a provided gene and integrated eigengene of your ciliary module (see Solutions). This measure ranks genes primarily based on their proximity for the center in the ciliary module (hub position). (XLS) Table S4 Cross-networks modules similarity.